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GST Reconciliation Feature

GSTR 9 & 9C with Auto Reconciliation

Bring GST Portal data and Tally books into one structured workflow. WeAudit helps teams reconcile annual GST information, investigate mismatches, and generate GSTR-9 working files for review and documentation.

GST Portal Data Sync
Tally Book Comparison
GSTR-9 Working Files
Mismatch Review

Simplify the Annual GST Reconciliation Process

Annual GST reconciliation often involves matching data across returns, portal downloads, Tally books, tax-payment records, and supporting schedules. When this work is managed in separate spreadsheets, teams can lose time collecting data and tracking questions.

WeAudit brings the available data into a structured workflow, helping professionals focus on the differences that need investigation and the documentation needed for a well-supported review.

Common challenges include:

  • Collecting annual GST data from multiple returns, books, and portal downloads
  • Comparing outward supplies, tax liability, input tax credit, and tax payments manually
  • Identifying differences caused by timing, amendments, classifications, or incomplete source records
  • Preparing a clear GSTR-9 working file and supporting reconciliation schedules
  • Tracking unresolved mismatches before the annual-return review is completed
  • Keeping organised evidence and explanations for review by the client or engagement team

What Is GSTR 9 & 9C Auto Reconciliation?

GSTR 9 and GSTR 9C auto reconciliation is a software-assisted process that compares available annual GST information with accounting records. It helps teams organise data, identify variances, prepare working schedules, and document the follow-up needed before finalisation.

WeAudit supports reconciliation and review—not legal interpretation or filing. The taxpayer and their authorised professional remain responsible for applying the applicable GST requirements, reviewing evidence, and completing submission obligations.

How WeAudit Helps Reconcile GSTR 9 & 9C

A practical process for bringing GST and accounting information into a review-ready workflow.

1

Connect GST and accounting data

Bring together the available GST Portal data and accounting records from Tally so the annual-return review starts from a consolidated source.

2

Map relevant GST information

Organise return, tax, turnover, and credit information into a structured reconciliation workflow for the selected financial year.

3

Run the reconciliation

WeAudit compares the available GST and book data to highlight matched items, differences, and entries that may need further review.

4

Review and resolve mismatches

Investigate exceptions with supporting records, document explanations, and apply professional judgement before finalising the working file.

5

Generate working reports

Export reconciliation reports and GSTR-9 working files to support preparation, review, and documentation.

Key Features for Annual GST Review

GST Portal Data Sync

Use available GST Portal information alongside books of account for a more connected annual-return review.

Tally Book Comparison

Compare GST-related data against Tally books to help surface discrepancies requiring review.

GSTR-9 Working File

Prepare a structured annual-return working file that supports data review before return preparation.

GSTR-9C Support

Create reconciliation-oriented schedules to assist teams working on the GSTR-9C reconciliation process where applicable.

Mismatch Identification

Bring differences between books and available GST data into view for focused investigation and resolution.

Tax and Turnover Review

Review turnover, tax liability, input tax credit, and tax payment information in one workflow.

Exception Follow-Up

Use structured outputs to record and follow up on unmatched or exceptional items.

Exportable Reports

Download reports and working schedules for review, client discussion, and engagement documentation.

Review the Differences That Need Attention

A structured reconciliation makes it easier to prioritise items that may need evidence, explanation, or correction.

Turnover Differences

Compare GST turnover and book turnover to identify differences that may need reconciliation or explanation.

Tax Liability Variances

Review differences in reported and book-based tax liability, including classification and timing considerations.

Input Tax Credit

Analyse available input tax credit information against accounting records and supporting documentation.

Tax Payment Reconciliation

Review tax payments and related records to support annual-return verification.

Amendments and Adjustments

Bring amendments, credit notes, debit notes, and other adjustments into the review process where available.

Unresolved Exceptions

Maintain visibility of unmatched items until they are investigated, explained, or otherwise addressed by the responsible team.

Benefits of Automated GST Reconciliation

Reduced Manual Matching

Spend less time combining portal downloads and accounting reports in spreadsheets.

More Focused Review

Direct attention toward differences and incomplete items instead of repeatedly checking matched data.

Structured Working Files

Create organised reports that help teams prepare, review, and discuss annual-return information.

Clearer Follow-Up

Make it easier to assign, track, and resolve reconciliation questions with clients or internal teams.

Consistent Workflow

Use a repeatable process across engagements and financial years while retaining professional review.

Audit-Ready Documentation

Retain reconciliation outputs and explanations as supporting working papers.

Manual vs Automated GSTR 9 & 9C Reconciliation

Review areaManual processWith WeAudit
Data collection Multiple downloads and spreadsheets Connected GST and book-data workflow
Reconciliation Manual matching Structured comparison and exceptions
Mismatch review Difficult to track Focused exception follow-up
Working file Prepared from scratch Exportable GSTR-9 working reports
Documentation Scattered supporting files Organised reconciliation outputs

Built for GST, Audit, and Finance Teams

Chartered Accountants

Prepare and review annual GST reconciliation working files more efficiently for client engagements.

GST Practitioners

Bring portal and accounting data together to investigate annual-return differences systematically.

Audit Firms

Standardise GST reconciliation procedures and review documentation across multiple clients.

Finance Teams

Review GST records against books before annual return preparation and client sign-off.

Internal Auditors

Assess GST reconciliation processes, exceptions, and documentation as part of compliance reviews.

CFO Offices

Gain clearer visibility into GST-related differences that may need action before the annual filing cycle.

Explore More Audit Automation Solutions

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Got Questions?

FAQs

It is the process of comparing annual GST return information with books of account and supporting records to identify and explain differences before the annual-return review is completed.

WeAudit brings available GST Portal and accounting data into a structured workflow, compares the information, highlights differences for review, and produces working reports.

Yes. The feature is designed to compare relevant data from Tally books with available GST information so teams can review and investigate differences.

No. WeAudit supports reconciliation and working-file preparation. Filing, eligibility assessment, certification, and final submission remain the responsibility of the taxpayer and their authorised professional.

Teams can review differences relating to turnover, tax liability, input tax credit, tax payments, adjustments, classifications, and timing, based on the available source data.

No. Automation helps reduce preparation effort and identify exceptions; GST professionals must still review source records, apply applicable law, and determine the final treatment.

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